STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppd4-hydroxyphenylpyruvic acid dioxgenase; ORF_ID:slr0090. (339 aa)    
Predicted Functional Partners:
slr1736
Homogentisate phytyltransferase; Involved in the synthesis of tocopherol (vitamin E). Catalyzes the condensation of homogentisate and phytyl diphosphate to form dimethylphytylhydrquinone.
  
  
 0.992
slr1737
ORF_ID:slr1737; unknown protein.
 
   
 0.979
erg6
Delta(24)-sterol C-methyltransferase; ORF_ID:slr0089; gene:erg6 or sed6; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
 
   
 0.974
hisC-2
Histidinol phosphate aminotransferase; ORF_ID:sll1958; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.916
aspC-2
Aspartate aminotransferase; Catalyzes the reversible conversion of aspartate and 2- oxoglutarate to glutamate and oxaloacetate. Has very weak prephenate aminotransferase activity ; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.913
slr1652
Phytol kinase; Catalyzes the CTP-dependent phosphorylation of phytol to phytylmonophosphate (PMP). Can also use UTP as an alternative phosphate donor, but not ATP or GTP. Is involved in tocopherol biosynthesis, via the utilization of phytol generated by chlorophyll degradation. Also plays a significant but not critical role in the recycling of phytol for the biosynthesis of new chlorophyll molecules.
      
 0.907
merR-2
Nitrilase; ORF_ID:sll0784.
   
 0.822
nylA
6-aminohexanoate-cyclic-dimer hydrolase; ORF_ID:sll0828.
  
 
  0.813
hypE
Hydrogenase expression/formation protein; ORF_ID:sll1462.
      
 0.680
dcoH
Pterin-4a-carbinolamine dehydratase; ORF_ID:ssl2296.
 
  
 0.658
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.