STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0505ORF_ID:slr0505; unknown protein. (190 aa)    
Predicted Functional Partners:
slr0503
ORF_ID:slr0503; hypothetical protein; Belongs to the ycf66 family.
 
     0.888
slr1634
ORF_ID:slr1634; unknown protein.
  
     0.692
gst1
Glutathione S-transferase; ORF_ID:sll1545.
  
   
 0.681
slr1307
ORF_ID:slr1307; unknown protein.
  
     0.669
slr0680
ORF_ID:slr0680; unknown protein.
  
     0.648
slt
Soluble lytic transglycosylase; ORF_ID:slr0534.
  
  
 0.621
sll1447
ORF_ID:sll1447; unknown protein.
  
     0.619
sll1940
ORF_ID:sll1940; unknown protein.
  
   
 0.607
ssr2047
ORF_ID:ssr2047; unknown protein.
  
     0.597
slr1218
ORF_ID:slr1218; unknown protein.
  
     0.586
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.