STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0479ORF_ID:sll0479; unknown protein. (150 aa)    
Predicted Functional Partners:
sll0477
Putative biopolymer transport protein ExbB-like 1; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity). Belongs to the ExbB/TolQ family.
 
 
 0.988
sll0242
ORF_ID:sll0242; unknown protein.
  
 
 0.862
fhuA-3
Ferrichrome-iron receptor; ORF_ID:slr1490.
  
  
 0.845
sll0478
ORF_ID:sll0478; unknown protein.
 
   
0.841
iutA
Ferric aerobactin receptor; ORF_ID:sll1206.
  
  
 0.839
sll1405
ORF_ID:sll1405; biopolymer transport ExbD protein homologue.
      
 0.822
slr1484
ORF_ID:slr1484; unknown protein.
      
 0.820
exbB
Biopolymer transport ExbB protein; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. Protects ExbD from proteolytic degradation and functionally stabilizes TonB (By similarity). Belongs to the ExbB/TolQ family.
  
 
 0.806
fecD
iron(III) dicitrate transport system permease protein; ORF_ID:slr1317; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.800
fecC
iron(III) dicitrate transport system permease protein; ORF_ID:slr1316; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.797
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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