STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0596ORF_ID:sll0596; unknown protein. (244 aa)    
Predicted Functional Partners:
sll0595
ORF_ID:sll0595; unknown protein.
     
 0.931
slr0596
Creatinine amidohydrolase; ORF_ID:slr0596.
 
  
 
0.927
codA
Cytosine deaminase; ORF_ID:slr1237.
 
  
  0.921
slr1535
ORF_ID:slr1535; unknown protein.
      
 0.811
sll1762
ORF_ID:sll1762; unknown protein.
      
 0.811
slr0711
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
      
 0.811
slr2144
ORF_ID:slr2144; unknown protein.
      
 0.717
slr1485
ORF_ID:slr1485; hypothetical protein.
      
 0.690
sll1863
ORF_ID:sll1863; unknown protein.
      
 0.680
sll1549
ORF_ID:sll1549; unknown protein.
      
 0.680
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.