Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpA | atpC | gene:10497590 | gene:10497589 | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ATP synthase g subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | rpl17 | gene:10497590 | gene:10498187 | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L17; ORF_ID:sll1819. | 0.815 |
| atpA | slr0801 | gene:10497590 | gene:10500223 | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ORF_ID:slr0801; unknown protein. | 0.693 |
| atpA | ssl1464 | gene:10497590 | gene:10500217 | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | ORF_ID:ssl1464; unknown protein. | 0.693 |
| atpC | atpA | gene:10497589 | gene:10497590 | ATP synthase g subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
| atpC | rpl17 | gene:10497589 | gene:10498187 | ATP synthase g subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 50S ribosomal protein L17; ORF_ID:sll1819. | 0.793 |
| atpC | slr0801 | gene:10497589 | gene:10500223 | ATP synthase g subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ORF_ID:slr0801; unknown protein. | 0.575 |
| atpC | ssl1464 | gene:10497589 | gene:10500217 | ATP synthase g subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ORF_ID:ssl1464; unknown protein. | 0.575 |
| cbbA | rpl17 | gene:10499681 | gene:10498187 | Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 50S ribosomal protein L17; ORF_ID:sll1819. | 0.671 |
| cbbA | slr0801 | gene:10499681 | gene:10500223 | Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | ORF_ID:slr0801; unknown protein. | 0.463 |
| cbbA | ssl1464 | gene:10499681 | gene:10500217 | Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | ORF_ID:ssl1464; unknown protein. | 0.463 |
| merR-2 | sll0783 | gene:10500221 | gene:10500222 | Nitrilase; ORF_ID:sll0784. | ORF_ID:sll0783; unknown protein. | 0.893 |
| merR-2 | sll0785 | gene:10500221 | gene:10500220 | Nitrilase; ORF_ID:sll0784. | ORF_ID:sll0785; unknown protein. | 0.932 |
| merR-2 | sll0786 | gene:10500221 | gene:10500219 | Nitrilase; ORF_ID:sll0784. | ORF_ID:sll0786; unknown protein. | 0.932 |
| merR-2 | sll0787 | gene:10500221 | gene:10500218 | Nitrilase; ORF_ID:sll0784. | ORF_ID:sll0787; hypothetical protein; To M.jannaschii MJ0640 and MJ0799. | 0.932 |
| merR-2 | slr0801 | gene:10500221 | gene:10500223 | Nitrilase; ORF_ID:sll0784. | ORF_ID:slr0801; unknown protein. | 0.774 |
| merR-2 | ssl1464 | gene:10500221 | gene:10500217 | Nitrilase; ORF_ID:sll0784. | ORF_ID:ssl1464; unknown protein. | 0.928 |
| rpl17 | atpA | gene:10498187 | gene:10497590 | 50S ribosomal protein L17; ORF_ID:sll1819. | ATP synthase a subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.815 |
| rpl17 | atpC | gene:10498187 | gene:10497589 | 50S ribosomal protein L17; ORF_ID:sll1819. | ATP synthase g subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.793 |
| rpl17 | cbbA | gene:10498187 | gene:10499681 | 50S ribosomal protein L17; ORF_ID:sll1819. | Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.671 |
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