Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| deaD | polA | gene:10500060 | gene:10500252 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | 0.444 |
| deaD | recA | gene:10500060 | gene:10500629 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.571 |
| deaD | recQ | gene:10500060 | gene:10498325 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | ATP-dependent DNA helicase; DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.945 |
| deaD | rpoA | gene:10500060 | gene:10498188 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.792 |
| deaD | rpoB | gene:10500060 | gene:10498228 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.823 |
| deaD | sll1366 | gene:10500060 | gene:10500425 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | Helicase of the snf2/rad54 family; ORF_ID:sll1366. | 0.941 |
| deaD | ssl2982 | gene:10500060 | gene:10499322 | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.734 |
| dnaN | polA | gene:10497730 | gene:10500252 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | 0.997 |
| dnaN | recA | gene:10497730 | gene:10500629 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.881 |
| dnaN | recQ | gene:10497730 | gene:10498325 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase; DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.887 |
| dnaN | rpoB | gene:10497730 | gene:10498228 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.655 |
| dnaN | sll1366 | gene:10497730 | gene:10500425 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Helicase of the snf2/rad54 family; ORF_ID:sll1366. | 0.952 |
| polA | deaD | gene:10500252 | gene:10500060 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | 0.444 |
| polA | dnaN | gene:10500252 | gene:10497730 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.997 |
| polA | recA | gene:10500252 | gene:10500629 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.992 |
| polA | recQ | gene:10500252 | gene:10498325 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | ATP-dependent DNA helicase; DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.980 |
| polA | rpoB | gene:10500252 | gene:10498228 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.536 |
| polA | sll1366 | gene:10500252 | gene:10500425 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3'-5' and 5'-3' exonuclease activity. | Helicase of the snf2/rad54 family; ORF_ID:sll1366. | 0.965 |
| recA | deaD | gene:10500629 | gene:10500060 | RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ATP-dependent RNA helicase; An ATP-dependent bidirectional RNA helicase with RNA- dependent ATPase activity; does not unwind dsDNA, uses only (d)ATP. Also has ATP-dependent RNA annealing activity; concurrent annealing and helicase activity promote strand-exchange activity. In vitro has low helicase processivity, annealing processivity is probably higher. Required for correct cold adaptation, probably by aiding translation of mRNAs required for photosynthesis and electron transport. Probably regulates the cold-shock-inducible expression of the GroESL chaperones. May partially regulate i [...] | 0.571 |
| recA | dnaN | gene:10500629 | gene:10497730 | RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.881 |
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