STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gst1Glutathione S-transferase; ORF_ID:sll1545. (271 aa)    
Predicted Functional Partners:
ggt
Gamma-glutamyltranspeptidase; ORF_ID:slr1269; Belongs to the gamma-glutamyltransferase family.
  
  
 0.919
gshB
Glutathione synthetase; ORF_ID:slr1238.
 
  
 0.916
sll1147
Glutathione S-transferase; ORF_ID:sll1147.
     
  0.900
sll1902
ORF_ID:sll1902; hypothetical protein.
     
  0.900
gst
Glutathione S-transferase; ORF_ID:sll0067; gene:gst or parB.
     
  0.900
rpoA
RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.832
slr0459
ORF_ID:slr0459; unknown protein.
  
 
 0.796
sll1940
ORF_ID:sll1940; unknown protein.
  
  
 0.766
slr1914
ORF_ID:slr1914; unknown protein.
  
     0.734
rpoB
RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.720
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.