ssr2781 protein (Synechocystis sp. PCC6803) - STRING interaction network

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

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[Homology]

Score

ssr2781

ORF_ID:ssr2781; unknown protein. (83 aa)

Predicted Functional Partners:

sll0696

0.760

slr1097

0.729

ssr3188

0.724

ssl0352

0.724

slr1918

0.717

degT

0.697

ssr1391

0.688

slr2000

0.684

sll1262

0.678

sll1447

0.678

Your Current Organism:

Synechocystis sp. PCC6803

NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
degT	ssr2781	gene:10500558	gene:10500559	Pleiotropic regulatory protein; ORF_ID:slr1666; Belongs to the DegT/DnrJ/EryC1 family.	ORF_ID:ssr2781; unknown protein.	0.697
sll0696	sll1262	gene:10497547	gene:10499017	ORF_ID:sll0696; unknown protein.	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	0.747
sll0696	sll1447	gene:10497547	gene:10499172	ORF_ID:sll0696; unknown protein.	ORF_ID:sll1447; unknown protein.	0.728
sll0696	slr1097	gene:10497547	gene:10497612	ORF_ID:sll0696; unknown protein.	ORF_ID:slr1097; unknown protein.	0.756
sll0696	slr1918	gene:10497547	gene:10498003	ORF_ID:sll0696; unknown protein.	ORF_ID:slr1918; unknown protein.	0.746
sll0696	slr2000	gene:10497547	gene:10498757	ORF_ID:sll0696; unknown protein.	ORF_ID:slr2000; hypothetical protein.	0.720
sll0696	ssl0352	gene:10497547	gene:10499924	ORF_ID:sll0696; unknown protein.	ORF_ID:ssl0352; hypothetical protein.	0.760
sll0696	ssr1391	gene:10497547	gene:10499004	ORF_ID:sll0696; unknown protein.	ORF_ID:ssr1391; hypothetical protein.	0.757
sll0696	ssr2781	gene:10497547	gene:10500559	ORF_ID:sll0696; unknown protein.	ORF_ID:ssr2781; unknown protein.	0.760
sll0696	ssr3188	gene:10497547	gene:10498565	ORF_ID:sll0696; unknown protein.	ORF_ID:ssr3188; hypothetical protein.	0.748
sll1262	sll0696	gene:10499017	gene:10497547	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:sll0696; unknown protein.	0.747
sll1262	slr1097	gene:10499017	gene:10497612	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:slr1097; unknown protein.	0.775
sll1262	slr1918	gene:10499017	gene:10498003	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:slr1918; unknown protein.	0.768
sll1262	slr2000	gene:10499017	gene:10498757	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:slr2000; hypothetical protein.	0.767
sll1262	ssl0352	gene:10499017	gene:10499924	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:ssl0352; hypothetical protein.	0.984
sll1262	ssr1391	gene:10499017	gene:10499004	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:ssr1391; hypothetical protein.	0.775
sll1262	ssr2781	gene:10499017	gene:10500559	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:ssr2781; unknown protein.	0.678
sll1262	ssr3188	gene:10499017	gene:10498565	NAD(P)H-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).	ORF_ID:ssr3188; hypothetical protein.	0.775
sll1447	sll0696	gene:10499172	gene:10497547	ORF_ID:sll1447; unknown protein.	ORF_ID:sll0696; unknown protein.	0.728
sll1447	ssr2781	gene:10499172	gene:10500559	ORF_ID:sll1447; unknown protein.	ORF_ID:ssr2781; unknown protein.	0.678

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Network Stats

number of nodes:

11

number of edges:

20

average node degree:

3.64

avg. local clustering coefficient:

0.847

expected number of edges:

36

PPI enrichment p-value:

0.998

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009401

Phosphoenolpyruvate-dependent sugar phosphotransferase system

11 of 117

1.18

1.76

1.31e-10

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0103111

D-glucosamine PTS permease activity

7 of 44

1.41

2.0

2.62e-07

GO:0008982

protein-N(PI)-phosphohistidine-sugar phosphotransferase activity

10 of 91

1.25

1.89

9.53e-10

GO:0016740

Transferase activity

11 of 363

0.69

0.66

1.80e-06

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016021

Integral component of membrane

9 of 441

0.52

0.37

0.0113

GO:0005886

Plasma membrane

8 of 389

0.52

0.37

0.0145

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1608

Import into cell

11 of 52

1.54

3.32

1.57e-14

CL:1701

Mixed, incl. CAT RNA-binding domain, and PTS system fructose IIA component

4 of 5

2.11

2.63

4.56e-06

CL:1610

Import into cell

7 of 42

1.43

2.09

1.42e-07

CL:1612

Fructose and mannose metabolism, and PTS system sorbose subfamily IIB component

6 of 34

1.46

1.93

1.95e-06

CL:1644

Mixed, incl. PTS system sorbose-specific iic component, and PTS system sorbose subfamily IIB component

3 of 7

1.84

1.5

0.00082

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00051

Fructose and mannose metabolism

7 of 56

1.31

1.72

6.76e-07

map02060

Phosphotransferase system (PTS)

11 of 130

1.14

1.66

4.74e-11

map00520

Amino sugar and nucleotide sugar metabolism

7 of 78

1.16

1.36

3.84e-06

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005887

Integral component of plasma membrane

4 of 40

1.21

0.89

0.0045

GOCC:0005886

Plasma membrane

11 of 305

0.77

8.54e-07

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03609

PTS system sorbose-specific iic component

6 of 15

1.81

2.85

1.35e-07

PF03830

PTS system sorbose subfamily IIB component

3 of 15

1.51

0.84

0.0171

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR004700

Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit

6 of 15

1.81

2.69

4.10e-07

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