STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr060947 kD protein; ORF_ID:slr0609. (383 aa)    
Predicted Functional Partners:
rps14
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
 
 
 0.715
hisI
phosphoribosyl-ATP pyrophosphohydrolase:phosphoribosyl-AMP cyclohydrolase; ORF_ID:slr0608; In the C-terminal section; belongs to the PRA-PH family.
     
 0.710
cobN-2
CobN protein; ORF_ID:sll1890.
 
  
 0.584
rpl28
50S ribosomal protein L28; ORF_ID:ssr1604; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.522
zntC
Periplasmic binding protein component of an ABC type zinc uptake transporter; ORF_ID:slr2043.
  
  
 0.494
mntC
Mn transporter; ORF_ID:sll1598; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.494
slr0610
ORF_ID:slr0610; unknown protein.
       0.487
rpl33
50S ribosomal protein L33; ORF_ID:ssr1398; Belongs to the bacterial ribosomal protein bL33 family.
  
  
 0.456
cbiH
Precorrin methylase; ORF_ID:slr0969; gene:cbiH or cobJ.
     
 0.434
cbiE
Precorrin-6y methylase; ORF_ID:sll0099; gene:cbiE or cobL.
     
 0.431
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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