STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT60212.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
SDT60223.1
Hypothetical protein.
 
     0.913
SDT60197.1
Hypothetical protein.
 
     0.874
SDT60174.1
Hypothetical protein.
 
     0.870
SDT45511.1
C-terminal novel E3 ligase, LRR-interacting.
  
     0.768
SDT41001.1
Hypothetical protein.
  
     0.765
SDS66700.1
C-terminal novel E3 ligase, LRR-interacting.
  
     0.760
SDT54134.1
Curlin associated repeat-containing protein.
  
     0.758
SDS69672.1
HDOD domain-containing protein.
  
     0.757
SDS05946.1
Uncharacterized membrane protein YhaH, DUF805 family.
  
     0.756
SDT58988.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.754
Your Current Organism:
Pseudomonas prosekii
NCBI taxonomy Id: 1148509
Other names: CCM 7990, LMG 26867, LMG:26867, P. prosekii, Pseudomonas prosekii Kosina et al. 2014, Pseudomonas sp. AN/28/1, strain AN/28/1
Server load: low (28%) [HD]