STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS27561.1Conjugative transfer protein PilN in PFGI-1-like cluster. (568 aa)    
Predicted Functional Partners:
ELS28648.1
Hypothetical protein.
  
 
 0.901
ELS26362.1
Hypothetical protein.
  
 
 0.901
ELS27557.1
PulF protein; Type II secretory pathway component, COG1459.
 
  
 0.896
ELS27562.1
IncP-type conjugative transfer protein TrbG.
 
    0.840
ELS25345.1
Hypothetical protein.
 
  
 0.815
ELS25342.1
Conjugative transfer pilus-tip adhesin protein PilV in PFGI-1-like cluster.
 
  
 0.797
ELS27560.1
PilO, putative.
     
 0.793
ELS27558.1
Conjugative transfer ATPase PilQ in PFGI-1-like cluster.
 
  
 0.582
ELS29322.1
PulD; Type II secretory pathway component, COG1450.
 
  
  0.552
ELS26361.1
General secretion pathway protein D.
 
  
  0.552
Your Current Organism:
Pseudomonas furukawaii
NCBI taxonomy Id: 1149133
Other names: DSM 10086, NBRC 110670, P. furukawaii, Pseudomonas balearica NRBC 110670, Pseudomonas furukawaii Kimura et al. 2018, Pseudomonas pseudoalcaligenes KF707, Pseudomonas pseudoalcaligenes KF707 = NBRC 110670, Pseudomonas sp. KF707, strain KF707
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.