STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6RXF6Aldehyde dehydrogenase. (496 aa)    
Predicted Functional Partners:
A0A2J6S4N6
Tryptophan synthase.
    
 0.831
A0A2J6RDX5
4-aminobutyrate aminotransferas-like protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.717
A0A2J6RIQ3
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.672
A0A2J6RFZ2
Deoxyribose-phosphate aldolase.
   
 0.654
A0A2J6S3R8
Aspartate aminotransferase.
    
 0.654
A0A2J6R4E0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.637
A0A2J6RK36
Citrate synthase; Belongs to the citrate synthase family.
  
 0.637
A0A2J6RSJ2
Triosephosphate isomerase.
   
 0.609
A0A2J6REC9
Putative Hydroxysteroid dehydrogenase-like protein 2.
  
 0.603
A0A2J6S383
Alanine--glyoxylate aminotransferas-like protein.
   
 0.603
Your Current Organism:
Hyaloscypha variabilis
NCBI taxonomy Id: 1149755
Other names: H. variabilis F, Hyaloscypha variabilis F, Meliniomyces variabilis F
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