STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6S3D4P-loop containing nucleoside triphosphate hydrolase protein. (549 aa)    
Predicted Functional Partners:
A0A2J6QUQ0
DNA repair protein rad18.
    
 
 0.883
A0A2J6R853
DNA polymeras-like protein subunit delta-2.
    
 
 0.723
L207DRAFT_7164
Uncharacterized protein.
    
 
 0.623
A0A2J6QVP9
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.516
A0A2J6RN85
Uncharacterized protein.
   
 
 0.516
A0A2J6RZY1
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.516
A0A2J6RKS5
Putative DNA repair protein rad-5.
    
 
 0.483
A0A2J6R767
Uncharacterized protein.
   
 
 0.473
A0A2J6RQL8
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
   
 0.466
A0A2J6RN43
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 
 0.463
Your Current Organism:
Hyaloscypha variabilis
NCBI taxonomy Id: 1149755
Other names: H. variabilis F, Hyaloscypha variabilis F, Meliniomyces variabilis F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.