STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089125_00820Unannotated protein. (109 aa)    
Predicted Functional Partners:
GCA_900089125_00819
Unannotated protein.
       0.885
GCA_900089125_00821
Unannotated protein.
       0.871
GCA_900089125_00818
Unannotated protein.
       0.666
GCA_900089125_00817
Unannotated protein.
       0.612
GCA_900089125_00813
Unannotated protein.
      
0.522
GCA_900089125_00815
Unannotated protein.
       0.522
GCA_900089125_00822
Unannotated protein.
       0.454
GCA_900089125_00823
Unannotated protein.
       0.454
GCA_900089125_00816
Unannotated protein.
       0.404
Your Current Organism:
Mycolicibacterium acapulense
NCBI taxonomy Id: 114977
Other names: ATCC 14473, CECT 3026, JCM 6402, M. acapulense, Mycobacterium acapulcensis, NCTC 10270, strain AC-103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.