STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089125_01421Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_900089125_00052
Unannotated protein.
   
 0.905
GCA_900089125_01040
Unannotated protein.
   
 0.905
GCA_900089125_04418
Unannotated protein.
   
 0.905
GCA_900089125_01039
Unannotated protein.
  
 0.902
GCA_900089125_04836
Unannotated protein.
  
 
 0.840
GCA_900089125_01047
Unannotated protein.
   
 0.820
GCA_900089125_01048
Unannotated protein.
   
 0.815
GCA_900089125_03522
Unannotated protein.
 
   
  0.801
GCA_900089125_00891
Unannotated protein.
  
 
 0.761
GCA_900089125_00892
Unannotated protein.
  
 
 0.761
Your Current Organism:
Mycolicibacterium acapulense
NCBI taxonomy Id: 114977
Other names: ATCC 14473, CECT 3026, JCM 6402, M. acapulense, Mycobacterium acapulcensis, NCTC 10270, strain AC-103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.