STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089125_02536Unannotated protein. (245 aa)    
Predicted Functional Partners:
GCA_900089125_02530
Unannotated protein.
 
   
 0.841
GCA_900089125_02532
Unannotated protein.
 
  
 0.836
GCA_900089125_01003
Unannotated protein.
 
   
 0.833
GCA_900089125_02539
Unannotated protein.
 
     0.802
GCA_900089125_01241
Unannotated protein.
  
     0.767
GCA_900089125_02531
Unannotated protein.
  
   
 0.735
GCA_900089125_00947
Unannotated protein.
  
  
 0.670
GCA_900089125_03667
Unannotated protein.
  
  
 0.670
GCA_900089125_05132
Unannotated protein.
  
 
 0.665
GCA_900089125_03541
Unannotated protein.
  
     0.648
Your Current Organism:
Mycolicibacterium acapulense
NCBI taxonomy Id: 114977
Other names: ATCC 14473, CECT 3026, JCM 6402, M. acapulense, Mycobacterium acapulcensis, NCTC 10270, strain AC-103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.