STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089125_02982Unannotated protein. (63 aa)    
Predicted Functional Partners:
GCA_900089125_00966
Unannotated protein.
    
 0.678
GCA_900089125_02981
Unannotated protein.
       0.676
GCA_900089125_00087
Unannotated protein.
  
  
  0.658
GCA_900089125_02352
Unannotated protein.
  
     0.654
GCA_900089125_04160
Unannotated protein.
     
 0.612
GCA_900089125_02983
Unannotated protein.
       0.584
GCA_900089125_02918
Unannotated protein.
  
     0.581
GCA_900089125_02985
Unannotated protein.
       0.581
GCA_900089125_02984
Unannotated protein.
       0.577
GCA_900089125_02910
Unannotated protein.
 
    0.532
Your Current Organism:
Mycolicibacterium acapulense
NCBI taxonomy Id: 114977
Other names: ATCC 14473, CECT 3026, JCM 6402, M. acapulense, Mycobacterium acapulcensis, NCTC 10270, strain AC-103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.