STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089125_03687Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_900089125_03686
Unannotated protein.
 
  
 0.998
GCA_900089125_03690
Unannotated protein.
 
   
 0.979
GCA_900089125_03689
Unannotated protein.
 
  
 0.971
GCA_900089125_03685
Unannotated protein.
       0.873
GCA_900089125_03688
Unannotated protein.
 
  
 0.850
GCA_900089125_03692
Unannotated protein.
 
     0.778
GCA_900089125_00759
Unannotated protein.
    
  0.614
GCA_900089125_01340
Unannotated protein.
    
  0.614
GCA_900089125_01995
Unannotated protein.
    
  0.614
GCA_900089125_01592
Unannotated protein.
  
  
 0.550
Your Current Organism:
Mycolicibacterium acapulense
NCBI taxonomy Id: 114977
Other names: ATCC 14473, CECT 3026, JCM 6402, M. acapulense, Mycobacterium acapulcensis, NCTC 10270, strain AC-103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.