STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900089125_04026Unannotated protein. (80 aa)    
Predicted Functional Partners:
GCA_900089125_02580
Unannotated protein.
  
 0.979
GCA_900089125_04912
Unannotated protein.
  
 
 0.847
GCA_900089125_04024
Unannotated protein.
       0.742
GCA_900089125_04025
Unannotated protein.
       0.742
GCA_900089125_04022
Unannotated protein.
       0.707
GCA_900089125_04027
Unannotated protein.
 
     0.683
GCA_900089125_01301
Unannotated protein.
    
 0.671
GCA_900089125_01958
Unannotated protein.
    
  0.668
GCA_900089125_03611
Unannotated protein.
    
  0.668
GCA_900089125_04019
Unannotated protein.
 
     0.631
Your Current Organism:
Mycolicibacterium acapulense
NCBI taxonomy Id: 114977
Other names: ATCC 14473, CECT 3026, JCM 6402, M. acapulense, Mycobacterium acapulcensis, NCTC 10270, strain AC-103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.