STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN45977.1Bacterial mobilisation protein (MobC). (128 aa)    
Predicted Functional Partners:
CUN45925.1
Relaxase/Mobilisation nuclease domain.
 
     0.948
CUN45811.1
FAD-dependent thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
 
  
  0.932
CUN45695.1
Helix-turn-helix.
 
     0.810
cwlS_1
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS precursor.
 
     0.780
CUN44040.1
Predicted outer membrane protein.
  
     0.768
CUN43976.1
RNA polymerase sigma factor SigF.
  
     0.767
CUN44738.1
Uncharacterised protein.
 
     0.759
CUN44856.1
Uncharacterised protein.
  
     0.753
CUN42891.1
Replication initiator protein A (RepA) N-terminus.
  
     0.752
traC
Antirestriction protein.
 
     0.737
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.