STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spmASpore maturation protein A. (195 aa)    
Predicted Functional Partners:
spmB
Spore maturation protein B.
  
 0.996
CUO84588.1
Stage III sporulation protein AD.
  
  
 0.773
CUO84495.1
Uncharacterized protein conserved in bacteria.
  
  
 0.709
spoIVA
Stage IV sporulation protein A.
  
   
 0.701
CUO63578.1
Sporulation protein YqfD.
  
  
 0.601
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.594
CUO18593.1
Stage II sporulation protein P.
  
   
 0.572
CUN63229.1
Stage II sporulation protein R.
  
   
 0.566
spoIIIAE
Stage III sporulation protein AE precursor.
  
  
 0.543
CUN74976.1
Uncharacterized protein conserved in bacteria.
  
  
 0.536
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.