STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolSPutative oxidoreductase. (333 aa)    
Predicted Functional Partners:
CUN80690.1
Uncharacterized oxidoreductase MSMEG_2408.
 
 0.835
CUN54759.1
Uncharacterized oxidoreductase MSMEG_2408.
 
0.813
CUN54848.1
Flavodoxin.
 
     0.673
CUO47195.1
Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.656
CUN54596.1
Alpha/beta hydrolase fold.
 
 
 0.619
CUN55036.1
Flavodoxin.
 
     0.603
CUO88913.1
Uncharacterised protein.
   
 0.558
CUN55171.1
4-carboxymuconolactone decarboxylase.
 
    0.550
CUO13091.1
Uncharacterised protein.
    
   0.534
dnaJ_1
Heat shock protein J.
    
   0.534
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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