STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN59762.1Cyclomaltodextrinase. (569 aa)    
Predicted Functional Partners:
malQ
4-alpha-glucanotransferase.
 
 
 0.975
glcB
PTS system glucoside-specific EIICBA component.
  
 
 0.938
imd
Isomalto-dextranase precursor.
    
 0.824
yicI_3
Alpha-xylosidase.
 
  
  0.818
ptsG_2
EIICBA-Glc.
  
 
 0.805
glgX
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.795
nplT
Neopullulanase.
  
  
 
0.783
pulA
Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family.
 
0.760
CUN59597.1
Cycloisomaltooligosaccharide glucanotransferase precursor.
 
  
  0.744
glgB_1
1%2C4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.735
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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