STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN95456.1Uncharacterised protein. (112 aa)    
Predicted Functional Partners:
CUN95507.1
Uncharacterised protein.
       0.812
CUN95552.1
Uncharacterised protein.
       0.812
CUN95591.1
Uncharacterised protein.
       0.812
CUN95406.1
Uncharacterised protein.
       0.799
CUN95362.1
Uncharacterised protein.
       0.772
CUN95651.1
Uncharacterised protein.
       0.755
CUN95270.1
Phage minor structural protein GP20.
       0.729
CUN95316.1
Uncharacterised protein.
       0.729
CUN95705.1
Uncharacterised protein.
       0.607
CUN95225.1
Uncharacterised protein.
       0.560
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.