STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO05583.1Uncharacterized acyl-CoA thioester hydrolase HI_0827. (160 aa)    
Predicted Functional Partners:
mdeA_2
Methionine gamma-lyase.
       0.648
bacD
Alanine-anticapsin ligase BacD.
  
  
 0.509
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
    0.443
CUO72927.1
2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carb oxylate synthase.
  
 
  0.439
sfp
4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily.
   
    0.422
nrdD_1
Anaerobic ribonucleoside-triphosphate reductase.
       0.415
CUO05544.1
IMP cyclohydrolase.
       0.409
CUN36116.1
Uncharacterised protein.
    
 0.407
calB
Coniferyl aldehyde dehydrogenase.
    
 0.407
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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