STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
beta-galIIIBeta-galactosidase III. (665 aa)    
Predicted Functional Partners:
yehU_2
Probable sensor-like histidine kinase YehU.
       0.701
CUO17429.1
Uncharacterized response regulatory protein SA0215.
       0.669
lacZ_2
Beta-galactosidase LacZ.
  
  
 
0.549
bglY_2
Beta-galactosidase BglY.
  
  
 
0.545
lacA_1
Beta-galactosidase LacA.
  
  
 
0.544
ebgA
Evolved beta-galactosidase subunit alpha.
    
  0.535
lacZ_3
Beta-galactosidase.
    
  0.535
lacZ_4
Beta-galactosidase.
    
  0.535
rafA_1
Alpha-galactosidase.
 
  
  0.519
rafA_3
Alpha-galactosidase.
 
  
  0.509
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.