STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO18200.1Uncharacterised protein. (386 aa)    
Predicted Functional Partners:
CUO18246.1
Uncharacterised protein.
 
     0.961
CUO52197.1
Photosystem I assembly protein Ycf3.
 
     0.776
CUN35323.1
Uncharacterised protein.
  
     0.775
CUN47827.1
DUF based on E. rectale Gene description.
  
     0.775
CUN63411.1
Uncharacterised protein.
  
     0.775
CUN98005.1
Uncharacterised protein.
  
     0.775
CUO60780.1
HlyD family secretion protein.
  
     0.775
CUN89236.1
Uncharacterised protein.
  
     0.774
CUO03117.1
Uncharacterised protein.
  
     0.774
CUO18121.1
Uncharacterized protein conserved in bacteria.
 
     0.774
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.