STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psaAPneumococcal surface adhesin A. (369 aa)    
Predicted Functional Partners:
CUO19694.1
Uncharacterized ABC transporter ATP-binding protein HI_1470.
 
 
 0.999
znuB
High-affinity zinc uptake system membrane protein znuB.
 
 0.999
CUN37240.1
Uncharacterised protein.
  
  
 0.680
rpsN1
BS-A; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.640
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.635
CUO19827.1
Predicted integral membrane protein.
       0.632
yjiA_1
Uncharacterized GTP-binding protein YjiA.
 
  
 0.608
purL
Phosphoribosylformylglycinamidine synthase 2.
     
 0.576
yjiA_2
Uncharacterized GTP-binding protein YjiA.
  
  
 0.557
yjiA_3
Uncharacterized GTP-binding protein YjiA.
  
  
 0.557
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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