STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO25631.1Coenzyme F420-reducing hydrogenase%2C delta subunit. (150 aa)    
Predicted Functional Partners:
CUO25593.1
Predicted NADH:ubiquinone oxidoreductase%2C subunit RnfC.
 
  0.999
CUO25668.1
NADH dehydrogenase subunit I.
 0.999
CUO25757.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
 
 0.998
CUO25707.1
Succinate dehydrogenase iron-sulfur subunit.
 
 0.993
CUO25539.1
Anaerobic sulfite reductase subunit A.
 
 0.984
pyrK_2
Dihydrdoorotate oxidase B%2C electron transfer subunit.
 
 
 0.978
rnfC_1
Nitrogen fixation protein rnfC.
 
  
  0.960
sdhA_1
Succinate dehydrogenase flavoprotein subunit.
 
     0.909
CUO45184.1
Formate hydrogenlyase complex iron-sulfur subunit.
  
 0.883
pyrK_1
Dihydrdoorotate oxidase B%2C electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
 
 0.648
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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