STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macB_6Macrolide export ATP-binding/permease protein MacB. (227 aa)    
Predicted Functional Partners:
macB_5
Macrolide export ATP-binding/permease protein MacB.
 0.999
CUO28762.1
Multidrug resistance protein MdtN.
 
 
 0.947
CUO28676.1
Efflux transporter%2C RND family%2C MFP subunit.
 
 
 0.908
gsiA_13
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
     
0.899
tcyB_2
L-cystine transport system permease protein tcyB.
 
   
  0.885
gsiA_11
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
     
0.787
artQ
Arginine transport system permease protein ArtQ.
 
  
 0.739
CUP01385.1
Uncharacterised protein.
  
  0.668
macB_2
Macrolide export ATP-binding/permease protein MacB.
   
 
0.667
CUN98386.1
FtsX-like permease family.
   
  0.667
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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