STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO66241.1Maltose-binding periplasmic proteins/domains. (616 aa)    
Predicted Functional Partners:
rcsC_1
Sensor kinase protein RcsC.
 
     0.941
ugpC_1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.836
ugpC_2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.836
ycjP_5
Inner membrane ABC transporter permease protein ycjP.
  
  0.799
ycjP_14
Inner membrane ABC transporter permease protein ycjP.
  
  0.799
yxeM
Probable amino-acid-binding protein yxeM precursor.
 
 
  0.795
CUO08070.1
Acidobacterial duplicated orphan permease.
  
     0.765
rpfC_1
Sensory/regulatory protein RpfC.
 
     0.762
senX3_1
Signal-transduction histidine kinase senX3.
  
     0.751
lacE
Lactose-binding protein precursor.
  
  
  0.732
Your Current Organism:
Fusicatenibacter saccharivorans
NCBI taxonomy Id: 1150298
Other names: Clostridium sp. HT03-11, Clostridium sp. HT03-14, Clostridium sp. HT03-186, Clostridium sp. HT03-22, Clostridium sp. KO-38, Clostridium sp. TT-111, DSM 26062, F. saccharivorans, Fusicatenibacter saccharivorans Takada et al. 2013, JCM 18507, YIT 12554, strain HT03-11
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