STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW11810.1Glycosyl hydrolases family 16. (253 aa)    
Predicted Functional Partners:
SFW38524.1
Glycerophosphoryl diester phosphodiesterase.
 
      0.900
SFW11820.1
Beta-glucosidase.
 
  0.894
SFW11839.1
Hypothetical protein.
     0.876
SFW11848.1
Starch-binding associating with outer membrane.
 
     0.852
SFW11860.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.846
SFW11827.1
Beta-glucanase/Beta-glucan synthetase.
 
    
0.739
SFW11869.1
Two component regulator propeller.
 
     0.715
SFW27019.1
CxxC motif-containing protein, DUF1111 family.
 
      0.533
SFW50149.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  0.464
SFW50083.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.