STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW13278.1Putative ABC transport system permease protein. (803 aa)    
Predicted Functional Partners:
SFW13295.1
ABC-type lipoprotein export system, ATPase component.
 
  0.950
SFW13311.1
Outer membrane protein.
 
   0.924
SFW13135.1
Putative ABC transport system ATP-binding protein.
 
  0.893
SFW13121.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.839
SFW13085.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.796
SFW13096.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
     0.693
SFW33340.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.642
SFW29042.1
Putative ABC transport system ATP-binding protein.
  
  0.620
SFW54082.1
Putative auto-transporter adhesin, head GIN domain.
 
     0.585
SFW33353.1
Outer membrane protein TolC.
  
   0.581
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.