STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW34639.1Iron complex outermembrane recepter protein. (784 aa)    
Predicted Functional Partners:
SFW39464.1
Uncharacterized iron-regulated membrane protein.
 
    0.702
SFW49186.1
Uncharacterized iron-regulated membrane protein.
 
    0.684
SFW76000.1
Uncharacterized iron-regulated membrane protein.
 
    0.683
SFW20232.1
FecR family protein.
  
   0.537
SFW34732.1
Siderophore synthetase component.
  
  
 0.526
SFW76008.1
FecR family protein.
  
   0.518
SFW66407.1
FecR family protein.
  
   0.517
SFW20335.1
FecR family protein.
  
   0.513
SFW50453.1
FecR family protein.
  
   0.511
SFW19297.1
FecR family protein.
  
   0.510
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.