STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW34801.1Cytochrome c. (162 aa)    
Predicted Functional Partners:
SFW21050.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.999
SFW27006.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
 0.884
SFW68654.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.826
SFW68600.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
 0.809
SFW38200.1
Cytochrome c oxidase subunit 3.
  
 0.780
SFW38219.1
Cytochrome c oxidase subunit 3.
  
 0.780
SFW68609.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
   
 0.773
SFW68644.1
Hypothetical protein.
 
 
 0.752
SFW12363.1
Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.738
SFW46146.1
Fe-S oxidoreductase.
   
 0.728
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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