STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW62406.1Glycosidase; Belongs to the glycosyl hydrolase 13 family. (611 aa)    
Predicted Functional Partners:
SFW62395.1
Alpha amylase, catalytic domain.
  
 
0.986
SFW62413.1
Maltose phosphorylase.
 
 
 0.979
SFW62479.1
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.946
SFW33845.1
Ethanolamine permease.
   
 0.936
SFW66574.1
Amino acid transporter.
   
 0.936
SFW46001.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.886
SFW26371.1
Phosphomannomutase.
 
   
 0.879
SFW68712.1
Trehalose 6-phosphate synthase/phosphatase.
  
 
 0.870
SFW75510.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
 
  
 0.852
SFW62430.1
Maltose/moltooligosaccharide transporter.
 
  
 0.843
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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