STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW66284.1Protein of unknown function. (280 aa)    
Predicted Functional Partners:
SFW23857.1
Protein of unknown function.
  
   0.773
SFW59618.1
4Fe-4S dicluster domain-containing protein.
   
   0.760
SFW66304.1
Amino acid adenylation domain-containing protein.
   
 0.746
SFW68735.1
Allosteric NADP-dependent malic enzyme.
    
  0.724
SFW27006.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
    
   0.684
SFW43802.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.592
SFW19784.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
   0.536
SFW24002.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
   0.536
SFW55427.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
   0.536
SFW59569.1
Putative acetyltransferase.
  
     0.473
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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