STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW70226.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
SFW70240.1
CBS domain-containing protein.
 
     0.802
SFW72165.1
Probable protein-translocating porin PorT (TC 1.B.44.1.1).
 
   
 0.783
SFW59870.1
Outer membrane protein OmpA.
  
 
 0.771
SFW70200.1
Periplasmic chaperone for outer membrane proteins Skp.
 
 
   0.771
SFW65622.1
Protein involved in gliding motility SprA.
  
     0.764
SFW43595.1
Hypothetical protein.
  
     0.763
SFW11495.1
WD40-like Beta Propeller Repeat.
  
 
 0.758
SFW37426.1
Gliding motility-associated protein GldL.
  
     0.745
SFW70207.1
Beta-barrel assembly machine subunit BamA.
 
 
   0.745
SFW70967.1
Protein involved in gliding motility GldB.
  
     0.722
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.