STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW74796.1Protein of unknown function. (233 aa)    
Predicted Functional Partners:
SFW74804.1
Starch-binding associating with outer membrane.
 
     0.945
SFW74810.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.934
SFW74770.1
Glycosyl hydrolases family 2, sugar binding domain.
 
     0.821
SFW74825.1
Beta-L-arabinofuranosidase, GH127.
 
     0.807
SFW60721.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.775
SFW60730.1
Starch-binding associating with outer membrane.
  
     0.775
SFW74790.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.729
SFW36163.1
Glycosyl hydrolase family 76.
  
     0.726
SFW50598.1
Signal transduction histidine kinase.
  
     0.668
SFW30933.1
Starch-binding associating with outer membrane.
  
     0.663
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.