STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW76513.1Type I restriction enzyme, S subunit. (411 aa)    
Predicted Functional Partners:
SFW76536.1
Type I restriction enzyme M protein.
 
 
 0.990
SFW74487.1
Type I restriction enzyme M protein.
 
 
 0.959
SFW76543.1
Type I restriction modification DNA specificity domain-containing protein.
 
     0.946
SFW74450.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.921
SFW76529.1
Uncharacterized conserved protein.
  
    0.856
SFW31511.1
N-6 DNA Methylase.
  
 
 0.829
SFW76505.1
Hypothetical protein.
  
    0.794
SFW74445.1
Hypothetical protein.
 
     0.777
SFW76522.1
Hypothetical protein.
       0.773
SFW74502.1
Type I restriction modification DNA specificity domain-containing protein.
 
     0.766
Your Current Organism:
Sinomicrobium oceani
NCBI taxonomy Id: 1150368
Other names: CGMCC 1.12145, Flavobacteriaceae bacterium SCSIO 03483, KCTC 23994, S. oceani, SCSIO 03483, Sinomicrobium oceani Xu et al. 2013
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