STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rutDUncharacterized protein; Belongs to the DmpD/TodF/XylF esterase family; KEGG: ebi:EbC_11610 aminoacrylate hydrolase; In linear amides. (257 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
   0.767
APD06872.1
UPF0701 protein YicC; Belongs to the UPF0701 family.
       0.757
DLAT|aceF|pdhC
Dihydrolipoyllysine-residue acetyltransferase; Catalyzes an unusual C-C bond hydrolysis of 2-hydroxy-6- oxo-6-phenylhexa-2,4-dienoic acid (HOPDA) to produce benzoic acid and 2-hydroxy-2,4-pentadienoic acid (HPD); Belongs to the AB hydrolase superfamily. BphD family; KEGG: rxy:Rxyl_2405 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
     0.675
APD06873.1
Hypothetical protein.
       0.547
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.445
APD06874.1
Hypothetical protein.
       0.410
Your Current Organism:
Flavobacteriaceae bacterium UJ101
NCBI taxonomy Id: 1150389
Other names: F. bacterium UJ101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.