STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD07428.1Lactocepin; Protease which breaks down milk proteins during the growth of the bacteria on milk. Belongs to the peptidase S8 family; Contains 2 FIVAR domains; Contains 1 peptidase S8 domain; KEGG: llc:LACR_C42 lactocepin. (1510 aa)    
Predicted Functional Partners:
APD05952.1
Hypothetical protein.
  
    0.460
APD07427.1
Hypothetical protein; KEGG: gfo:GFO_2302 aminopeptidase; Aminopeptidases.
  
    0.450
APD05955.1
Hypothetical protein.
  
    0.408
APD06876.1
Hypothetical protein; KEGG: chz:CHSO_4566 zinc protease; Metalloendopeptidases; Belongs to the peptidase M16 family.
  
     0.407
Your Current Organism:
Flavobacteriaceae bacterium UJ101
NCBI taxonomy Id: 1150389
Other names: F. bacterium UJ101
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