STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06675.1Predicted pyridoxal phosphate-dependent enzyme; Belongs to the DegT/DnrJ/EryC1 family. (360 aa)    
Predicted Functional Partners:
CCG07952.1
Polysaccharide biosynthesis protein CapD.
  
 0.941
CCG06590.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.815
CCG06785.1
Oxidoreductase, Gfo/Idh/MocA family protein.
  
  
 0.704
CCG06615.1
Putative glycosyl transferase (Glycosyl transferase family 2).
  
  
 0.667
CCG06674.1
N-acetyltransferase domain-containing protein; Unnamed protein product.
 
  
 0.659
CCG07800.1
Transferase hexapeptide repeat.
  
  
 0.642
CCG06587.1
Putative uncharacterized protein.
  
  
 0.617
rmbA
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.608
CCG08468.1
Glycosyltransferases involved in cell wall biogenesis.
  
 0.604
CCG06855.1
Nucleotidyl transferase.
  
  
 0.599
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.