STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06865.1FAD dependent oxidoreductase. (455 aa)    
Predicted Functional Partners:
CCG07092.1
FAD dependent oxidoreductase, putative.
  
  
 
0.918
CCG08481.1
FAD dependent oxidoreductase, putative.
  
  
 
0.916
CCG09644.1
L-glutamine synthetase.
 
  
 0.829
CCG09643.1
L-glutamine synthetase.
 
  
 0.824
puuA
Gamma-glutamylputrescine synthetase; Belongs to the glutamine synthetase family.
 
  
 0.807
thiG
Thiazole biosynthesis protein thiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.771
CCG07391.1
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.709
CCG08930.1
Aminomethyltransferase; Belongs to the GcvT family.
 
 
 0.661
CCG09562.1
Sarcosine oxidase, alpha subunit family; Belongs to the GcvT family.
 
 
 0.615
CCG06864.1
Extracellular solute-binding protein, family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
   
 0.606
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.