STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypAHydrogenase expression/synthesis, HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)    
Predicted Functional Partners:
CCG06894.1
Hydrogenase accessory protein HypB.
 
 
 0.987
hypF
Hydrogenase maturation factor.
 
   
 0.972
hypD
Hydrogenase expression/formation protein HypD.
 
  
 0.967
hypC
Hydrogenase expression/formation protein HypC.
 
  
 0.964
hypE
Hydrogenase expression/formation protein HypE.
 
  
 0.961
CCG06902.1
Nickel-dependent hydrogenase, large subunit.
 
 
 0.861
CCG06901.1
Nickel-dependent hydrogenase, large subunit.
 
 
 0.840
CCG06896.1
Ni,Fe-hydrogenase I large subunit.
  
  
 0.835
CCG09192.1
Cobalamin synthesis protein/P47K.
 
 
 0.761
CCG06744.1
Putative uncharacterized protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
   0.755
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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