STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06907.1Diguanylate cyclase/phosphodiesterase. (649 aa)    
Predicted Functional Partners:
CCG09364.1
Sensor protein.
  
 
 0.947
CCG09039.1
Guanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation.
 
 
 0.934
CCG08293.1
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
 
 
 0.928
CCG08277.1
Sensor protein.
  
 
 0.924
CCG09501.1
Sensor protein.
  
 
 0.924
CCG06665.1
Sensor protein.
  
  
 0.885
CCG08428.1
Sensor protein.
  
  
 0.885
CCG09263.1
Sensor protein.
  
  
 0.885
CCG06858.1
Hypothetical 918 kDa protein Y4LL.
 
 
 0.858
CCG07710.1
Putative diguanylate cyclase (GGDEF domain).
 
 
 0.857
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.