STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG06936.1Putative uncharacterized protein. (285 aa)    
Predicted Functional Partners:
CCG06937.1
NifT/FixU.
 
    0.979
CCG06938.1
NifZ.
 
    0.962
CCG06939.1
Leucine rich repeat variant.
 
    0.920
CCG09160.1
Putative uncharacterized protein.
 
  
 0.857
CCG06941.1
Nitrogenase cofactor biosynthesis protein NifB.
 
    0.850
nifW
NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
    0.834
CCG09163.1
Nitrogenase MoFe cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.812
CCG09158.1
NifQ protein.
 
    0.800
CCG09161.1
Dinitrogenase iron-molybdenum cofactor biosynthesis.
 
    0.791
CCG09747.1
Ferredoxin.
 
    0.790
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.