STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07030.1MutT/nudix family protein. (337 aa)    
Predicted Functional Partners:
CCG08152.1
Putative uncharacterized protein.
  
     0.535
CCG07029.1
Universal stress protein UspA and related nucleotide-binding proteins.
  
  
 0.493
CCG07474.1
Putative uncharacterized protein.
 
   
 0.475
CCG07781.1
Cytochrome c1.
  
     0.449
polA
DNA polymerase A; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.443
CCG07031.1
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
     
 0.436
CCG09815.1
Putative uncharacterized protein.
  
     0.434
CCG08720.1
Putative uncharacterized protein.
  
    0.412
CCG08687.1
Mammalian cell entry related.
 
    0.403
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.