STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07041.1Putative uncharacterized protein. (272 aa)    
Predicted Functional Partners:
CCG07040.1
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase.
       0.773
CCG08500.1
Putative uncharacterized protein.
  
     0.650
CCG09091.1
Putative uncharacterized protein.
  
     0.629
CCG07042.1
Putative uncharacterized protein.
       0.620
CCG08499.1
Putative uncharacterized protein.
  
     0.612
CCG06688.1
Chemotaxis sensory transducer.
  
     0.573
CCG07385.1
Phasin.
  
     0.554
CCG09534.1
HAD-superfamily hydrolase, subfamily IIA.
  
     0.545
CCG06780.1
Outer membrane chaperone Skp (OmpH).
  
     0.542
CCG09658.1
TonB-dependent receptor.
  
     0.506
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.