STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCG07072.1Transcriptional regulator, XRE family. (201 aa)    
Predicted Functional Partners:
CCG07655.1
Putative uncharacterized protein.
  
     0.732
CCG09157.1
Leucine-rich repeat.
 
     0.721
CCG08068.1
Putative uncharacterized protein.
  
     0.669
CCG07090.1
Putative uncharacterized protein.
  
     0.667
CCG07303.1
Putative uncharacterized protein.
  
   
 0.614
CCG09166.1
Transcriptional regulatory protein.
  
 
 0.601
CCG07658.1
Putative uncharacterized protein.
 
   
 0.598
CCG08147.1
Putative uncharacterized protein.
  
     0.594
CCG08562.1
Putative uncharacterized protein.
  
     0.577
CCG08078.1
Sensor protein.
  
     0.568
Your Current Organism:
Pararhodospirillum photometricum
NCBI taxonomy Id: 1150469
Other names: P. photometricum DSM 122, Pararhodospirillum photometricum DSM 122, Rhodospirillum photometricum DSM 122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.